Open Microscopy Environment

Hi

It seems to be missing the field "RowsPerStrip" (tag ID 0x0116 I think) from the Exif metadata reported by Bio-Formats for all of our working images. It is returned by other readers that we are using for comparison, particularly matlab's imfinfo.

Might it be the case that it is being reported under other name?

You can find a sample image here:
https://www.dropbox.com/s/v9dfa8543lmck ... 5_u001.tif

Thank you,
Marcelo

Hi Marcelo,

The RowsPerStrip tag is parsed, but not currently included in Bio-Formats' original metadata table. We can add this in the 5.1.0 release, but for now you can retrieve the RowsPerStrip tag like this:

Code: Select all

rowsPerStrip = loci.formats.tiff.TiffParser('/path/to/file.tiff').getFirstIFD().getRowsPerStrip();


Regards,
-Melissa

Hi Melissa.

Thanks for your response. The command line works perfectly. We would welcome this feature if present in 5.1.0.

Best,
Marelo