Open Microscopy Environment

Hi,

I develop a java application to render images : these images are from different formats.

Here you can find my code :

Code: Select all

BufferedImageReader bufferedImageReader = new BufferedImageReader(new ImageReader());
            BufferedImage bufferedImage;
            try {
                bufferedImageReader.setId(imagePath);
                // OpenImage(0) <=> open the image corresponding to the first channel, the first z and the first t
                bufferedImage = bufferedImageReader.openImage(0);
            } catch (FormatException ex) {
                // Can not read the image
                bufferedImage = null;
            } catch (IOException ex) {
                // Can not read the image
                bufferedImage = null;
            }

I have tested the rendering of an ome.tiff image with the multi-channel.ome.tif file downloaded from this site : http://www.openmicroscopy.org/site/supp ... /data.html

When I open this file with ImageJ, I see that the background is black (see the attached file ImageJ.tiff). But in my case, the rendering is grey (see the attached file MyRendering.tiff).

Does someone have an idea ?

Thank you in advance for your help

Céline