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Bulk Annotations HDF File

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Bulk Annotations HDF File

Postby DavidEgan » Thu Feb 22, 2018 12:53 pm

There is very useful information in the bulk_annotations file in the Attachments for each screen. It appears to be a HDF file however. I looked at HDF Viewer but there doesn't appear to be an executable version. Can anyone recommend a simple viewer that would allow me to extract, for example well ID with reagent ID information? Thanks.
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Re: Bulk Annotations HDF File

Postby Dominik » Fri Feb 23, 2018 9:48 am

Hi David,

I think for HDFView you have to register at the website and login to download the binaries. There's also HDF Compass, which is good for viewing but can't search or export data as far as I know: https://support.hdfgroup.org/projects/compass/ . For extracting specific information you might want to use the h5dump command line program, which comes with the HDF5 tools package: https://support.hdfgroup.org/HDF5/doc/RM/Tools.html

Regards,
Dominik
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