Open Microscopy Environment

Does anyone have or know of a utility script to do image stitching in Omero?

Best,

Martin
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Martin Spitaler, PhD

FILM - Facility for Imaging by Light Microscopy
- Facility Manager -
Sir Alexander Fleming Building, desk 401
Imperial College London / South Kensington
Exhibition Road
London SW7 2AZ
UK

Tel. +44-(0)20-759-42023
E-mail m.spitaler@imperial.ac.uk
Website: http://imperial.ac.uk/imagingfacility

We haven't done a lot of image stitching here in Dundee but you could certainly try getting the OMERO ImageJ plug-in running and attempt stitching using one of the excellent stitching plugin-ins available in Fiji:

http://fiji.sc/wiki/index.php/Image_Stitching

Your results really will depend on how large the images are that you want to stitch, their overlap, etc.