Batch converstion of nd2 files
Posted: Tue Mar 19, 2013 8:19 pm
Hello,
Is there any way to batch convert nd2 sequence files to tiff/jpeg formats. The Nis Elements Viewer does this well if you have just a few sequence files. I have a few hundred files that need to be converted and it is proving to be a tedious process. I am also trying to find a batch process so that the conversion process is easy in the future as well.
I tried using bfconvert with the latest version of loci_tools, but this seems to have issues with the current nd2 formats. There does not seem to be any other batch conversion apps that I can find. Any help would be much appreciated.
I am on a Mac but have access to windows machines.
Thanks
Is there any way to batch convert nd2 sequence files to tiff/jpeg formats. The Nis Elements Viewer does this well if you have just a few sequence files. I have a few hundred files that need to be converted and it is proving to be a tedious process. I am also trying to find a batch process so that the conversion process is easy in the future as well.
I tried using bfconvert with the latest version of loci_tools, but this seems to have issues with the current nd2 formats. There does not seem to be any other batch conversion apps that I can find. Any help would be much appreciated.
I am on a Mac but have access to windows machines.
Thanks