Open Microscopy Environment

Hi all,

I wanted to add OMERO.searcher v1.1.2 (recent) service to OEMRO 5.2.0 server but, then I noticed that in README file (downloaded from http://murphylab.web.cmu.edu/software/searcher/) list the following prerequisite:

OMERO PSLID
-----------

Pre-Requisites
--------------
* omero.server 4.3.3 (not tested on other releases)
* omero.web
* libFreeImage
* python v2.5.2 (not tested on other versions)
*list of python packages: numpy, scipy, mahotas, milk, matplotlib and pyslic
* Java v1.6.0_16 (not tested on other versions)
* PBS for submitting feature calculations as jobs to a queue (optional)

We are running OMERO 5.2.0 with Java 1.7.x and wanted to know whether anyone here has used OMERO.searcher v.1.1.2 with configs higher than mentioned in prerequisites?

Regards,
Raf.

Hi Raf

OMERO.searcher was last tested with early versions of OMERO 5.0. It won't work with 5.0.6 and later due to a CSRF security fix that had to be implemented in OMERO.web.

Apart from that I don't think there are any major API changes that would prevent it from working with OMERO 5.2. If you want to have a go at fixing it have a look at
https://www.openmicroscopy.org/site/sup ... /CSRF.html
and open a pull request against
https://github.com/openmicroscopy/omero_searcher

Simon