Open Microscopy Environment

Vanilla Centos 5.3 network install with the "Server" base package set using the OpenJDK.

As root...

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rpm -Uvh http://download.fedora.redhat.com/pub/epel/5/i386/epel-release-5-2.noarch.rpm
yum install java-1.6.0-openjdk
cd /etc/yum.repos.d/
wget http://www.zeroc.com/download/Ice/3.3/rhel5/zeroc-ice.repo
yum install ice ice-java-devel ice-python-devel ice-servers ice-utils
rpm -Uvh http://dag.wieers.com/rpm/packages/python-sqlite2/python-sqlite2-2.3.3-1.el5.rf.x86_64.rpm
yum install postgresql-server
vi /var/lib/pgsql/data/pg_hba.conf (Change 127.0.0.1/32 from "ident sameuser" to "md5")
/etc/init.d/postgresql start
sudo -u postgres createuser -P -D -R -S omero
sudo -u postgres createdb -O omero omero
sudo -u postgres createlang plpgsql omero
sudo mkdir /OMERO
chown -R <user>:<group> /OMERO


As <user>...

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wget http://cvs.openmicroscopy.org.uk/snapshots/omero/omero-Beta4.0.3.tar.bz2
tar jxvf omero-Beta4.0.3.tar.bz2
cd omero_dist
bin/omero db script
psql -h localhost -U omero omero < OMERO4__0.sql
bin/omero admin start
bin/omero admin ice
server enable Web
server start Web


I think the first line of this guide needs to be updated:

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rpm -Uvh http://download.fedora.redhat.com/pub/epel/5/i386/epel-release-5-2.noarch.rpm

Doesn't do anything, and when I navigated there manually on a browser it didn't find anything. Is there a new URL?

Edit: decided to not be lazy. they use release-5-3 now. http://download.fedora.redhat.com/pub/epel/5/i386/

Will this also work? Or is it safer to go with an archive 5-2?

release-5-3 should be just fine Nick.

Stickied.

Hi all,
I have the following problem:

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ERROR: Could not import omero.cli! (No module named Ice)

I have looked on the forum, this seems to be an ICE issue, but my ICE installation seems to be correctly set-up:

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[root@isin04 ~]# yum install ice ice-java-devel ice-python-devel ice-servers ice-utils

...

Package ice-3.3.1-1.rhel4.noarch already installed and latest version
Package ice-java-devel-3.3.1-1.rhel4.x86_64 already installed and latest version
Package ice-python-devel-3.3.1-1.rhel4.x86_64 already installed and latest version
Package ice-servers-3.3.1-1.rhel4.x86_64 already installed and latest version
Package ice-utils-3.3.1-1.rhel4.x86_64 already installed and latest version
Nothing to do

Can anyone help me?

Thank you in advance!

What happens if you just open up Python and try to import Ice? For example:

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$ python
Python 2.6.1 (r261:67515, Feb 11 2010, 15:47:53)
[GCC 4.2.1 (Apple Inc. build 5646)] on darwin
Type "help", "copyright", "credits" or "license" for more information.
>>> import Ice
>>>


Hi,
thanks for your reply!

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>>> import Ice
Traceback (most recent call last):
  File "<stdin>", line 1, in ?
ImportError: No module named Ice

At this point I'm wondering, is ICE installed or not?

Looks like you don't have Ice installed correctly.
Maybe it's not on your PYTHONPATH?

Try

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$ $PYTHONPATH
-bash: /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/:/opt/Ice-3.3.1/python:


Will