server cannot start
Posted: Mon May 20, 2013 1:59 pmHi,
our OMERO service used to work fine, but today I find i cannot connect to server. Then i tried manually start the server by omero admin start with the following results :
when run omero admin diagnostics, here is the output
I searched a while in the forum but have not found the same error, here is the master.err
It sounds the postgres problem, or java auto update problem?
many thanks for help.
our OMERO service used to work fine, but today I find i cannot connect to server. Then i tried manually start the server by omero admin start with the following results :
- Code: Select all
./bin/omero admin start
No descriptor given. Using etc/grid/default.xml
Waiting on startup. Use CTRL-C to exit
.............................
Failed to startup some components after 5 minutes
Calling "stop" on remaining components
Waiting on shutdown. Use CTRL-C to exit
when run omero admin diagnostics, here is the output
- Code: Select all
omero@omerop:/OMERO/OMERO.server-Beta-4.3.4$ ./bin/omero admin diagnostics
================================================================================
OMERO Diagnostics 4.3.4-dbcbce5a-b4
================================================================================
Commands: java -version 1.6.0 (/usr/bin/java)
Commands: python -V 2.6.6 (/usr/bin/python)
Commands: icegridnode --version 3.3.1 (/usr/bin/icegridnode)
Commands: icegridadmin --version 3.3.1 (/usr/bin/icegridadmin)
Commands: psql --version 8.4.17 (/usr/bin/psql -- 2 others)
Server: icegridnode not started
Log dir: /OMERO/OMERO.server/var/log exists
Log files: Blitz-0.log 179.0 MB errors=14 warnings=11
Log files: Blitz-0.log.1 512.0 MB errors=27239 warnings=19711
Log files: Blitz-0.log.2 512.0 MB errors=32544 warnings=8852
Log files: Blitz-0.log.3 512.0 MB errors=9324 warnings=48
Log files: Blitz-0.log.4 512.0 MB errors=9 warnings=764
Log files: Blitz-0.log.5 512.0 MB errors=3 warnings=708
Log files: Blitz-0.log.6 512.0 MB errors=966 warnings=2805
Log files: DropBox.log 110.0 KB errors=12 warnings=45
Log files: FileServer.log 15.0 KB
Log files: Indexer-0.log 3.0 MB errors=555 warnings=58
Log files: MonitorServer.log 56.0 KB errors=0 warnings=2
Log files: OMEROweb.log 350.0 KB errors=393 warnings=34
Log files: PixelData-0.log 20.0 MB errors=933 warnings=310
Log files: Processor-0.log 282.0 KB errors=28 warnings=219
Log files: Tables-0.log 175.0 KB errors=28 warnings=216
Log files: TestDropBox.log n/a
Log files: master.err 107.0 KB errors=1 warnings=0
Log files: master.out 0.0 KB
Log files: Total size 3277.21 MB
Parsing Blitz-0.log:[line:884055] => Server restarted <=
Parsing Blitz-0.log:[line:1093436] Your postgres password seems to be invalid
Parsing Blitz-0.log:[line:1093688] Your postgres password seems to be invalid
Parsing Blitz-0.log:[line:1093940] Your postgres password seems to be invalid
Environment:OMERO_HOME=/OMERO/OMERO.server
Environment:OMERO_NODE=(unset)
Environment:OMERO_MASTER=(unset)
Environment:PATH=/usr/local/bin:/usr/bin:/bin:/usr/local/games:/usr/games:/usr/lib/jvm/java-6-sun/bin:/usr/share/Ice-3.3.1:/usr/lib/postgresql/8.4/bin:/OMERO/OMERO.server/bin
Environment:ICE_HOME=/usr/share/Ice-3.3.1
Environment:LD_LIBRARY_PATH=/usr/share/java:/usr/lib:
Environment:DYLD_LIBRARY_PATH=(unset)
OMERO data dir: '/OMERO' Exists? True Is writable? True
OMERO.web status... [RUNNING] (PID 2984)
I searched a while in the forum but have not found the same error, here is the master.err
- Code: Select all
05/20/13 14:25:56.073 OMERO.Glacier2: warning: unable to contact permissions verifier `BlitzVerifier@BlitzAdapters'
Reference.cpp:1546: Ice::NoEndpointException:
no suitable endpoint available for proxy `BlitzVerifier -t @ BlitzAdapters'
05/20/13 14:25:56.075 OMERO.Glacier2: warning: unable to contact session manager `BlitzManager@BlitzAdapters'
Reference.cpp:1546: Ice::NoEndpointException:
no suitable endpoint available for proxy `BlitzManager -t @ BlitzAdapters'
It sounds the postgres problem, or java auto update problem?
many thanks for help.