omero 5 on Ubuntu 13.10
Posted: Wed Nov 20, 2013 1:35 pm
Hi,
Ok finally after upgrade and restart the omero server work, however I still have the same error in the Blitz log.
I had installed omero server 5 on Ubuntu 13.04. And after upgrade to 13.10 the server wan't start. There one error in the Blitz.log :
2013-11-20 14:15:14,355 ERROR [ omero.cmd.SessionI] (l.Server-6) Unknown servant type: ome.services.blitz.impl.Config
I@34735e07
omero admin diagnostics
================================================================================
OMERO Diagnostics 5.0.0-beta1-ice34-b3470
================================================================================
Commands: java -version 1.7.0 (/usr/bin/java -- 2 others)
Commands: python -V 2.7.5 (/usr/bin/python)
Commands: icegridnode --version 3.4.2 (/usr/bin/icegridnode)
Commands: icegridadmin --version 3.4.2 (/usr/bin/icegridadmin)
Commands: psql --version 9.1.10 (/usr/bin/psql -- 2 others)
Server: icegridnode running
Server: Blitz-0 active (pid = 20363, enabled)
Server: DropBox active (pid = 20381, enabled)
Server: FileServer active (pid = 20384, enabled)
Server: Indexer-0 active (pid = 20386, enabled)
Server: MonitorServer active (pid = 20388, enabled)
Server: OMERO.Glacier2 active (pid = 20390, enabled)
Server: OMERO.IceStorm active (pid = 20392, enabled)
Server: PixelData-0 active (pid = 20395, enabled)
Server: Processor-0 active (pid = 20402, enabled)
Server: Tables-0 active (pid = 20419, enabled)
Server: TestDropBox inactive (enabled)
OMERO: SSL port 4064
OMERO: TCP port 4063
Log dir: /opt/OMERO/OMERO.server/var/log exists
Log files: Blitz-0.log 32.0 KB errors=1 warnings=0
Log files: DropBox.log 1.0 KB
Log files: FileServer.log 0.0 KB
Log files: Indexer-0.log 31.0 KB
Log files: MonitorServer.log 1.0 KB
Log files: OMEROweb.log 0.0 KB
Log files: OMEROweb_request.log 0.0 KB
Log files: PixelData-0.log 1.0 KB
Log files: Processor-0.log 1.0 KB
Log files: Tables-0.log 0.0 KB
Log files: TestDropBox.log n/a
Log files: master.err 0.0 KB
Log files: master.out 0.0 KB
Log files: Total size 0.07 MB
Parsing Blitz-0.log:[line:33] => Server restarted <=
Environment:OMERO_HOME=/opt/OMERO/OMERO.server
Environment:OMERO_NODE=(unset)
Environment:OMERO_MASTER=(unset)
Environment:OMERO_TEMPDIR=/tmp
Environment:PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/usr/lib/jvm/java-7-oracle/bin:/usr/share/Ice-3.4.2:/usr/lib/postgresql/9.1/bin:/opt/OMERO/OMERO.server/bin
Environment:ICE_HOME=/usr/share/Ice-3.4.2
Environment:LD_LIBRARY_PATH=/usr/share/java:/usr/lib:
Environment:DYLD_LIBRARY_PATH=(unset)
OMERO data dir: '/OMERO' Exists? True Is writable? True
OMERO temp dir: '/tmp/omero/tmp' Exists? True Is writable? True (Size: 0)
OMERO.web status... [RUNNING] (PID 21509)
Ok finally after upgrade and restart the omero server work, however I still have the same error in the Blitz log.
I had installed omero server 5 on Ubuntu 13.04. And after upgrade to 13.10 the server wan't start. There one error in the Blitz.log :
2013-11-20 14:15:14,355 ERROR [ omero.cmd.SessionI] (l.Server-6) Unknown servant type: ome.services.blitz.impl.Config
I@34735e07
omero admin diagnostics
================================================================================
OMERO Diagnostics 5.0.0-beta1-ice34-b3470
================================================================================
Commands: java -version 1.7.0 (/usr/bin/java -- 2 others)
Commands: python -V 2.7.5 (/usr/bin/python)
Commands: icegridnode --version 3.4.2 (/usr/bin/icegridnode)
Commands: icegridadmin --version 3.4.2 (/usr/bin/icegridadmin)
Commands: psql --version 9.1.10 (/usr/bin/psql -- 2 others)
Server: icegridnode running
Server: Blitz-0 active (pid = 20363, enabled)
Server: DropBox active (pid = 20381, enabled)
Server: FileServer active (pid = 20384, enabled)
Server: Indexer-0 active (pid = 20386, enabled)
Server: MonitorServer active (pid = 20388, enabled)
Server: OMERO.Glacier2 active (pid = 20390, enabled)
Server: OMERO.IceStorm active (pid = 20392, enabled)
Server: PixelData-0 active (pid = 20395, enabled)
Server: Processor-0 active (pid = 20402, enabled)
Server: Tables-0 active (pid = 20419, enabled)
Server: TestDropBox inactive (enabled)
OMERO: SSL port 4064
OMERO: TCP port 4063
Log dir: /opt/OMERO/OMERO.server/var/log exists
Log files: Blitz-0.log 32.0 KB errors=1 warnings=0
Log files: DropBox.log 1.0 KB
Log files: FileServer.log 0.0 KB
Log files: Indexer-0.log 31.0 KB
Log files: MonitorServer.log 1.0 KB
Log files: OMEROweb.log 0.0 KB
Log files: OMEROweb_request.log 0.0 KB
Log files: PixelData-0.log 1.0 KB
Log files: Processor-0.log 1.0 KB
Log files: Tables-0.log 0.0 KB
Log files: TestDropBox.log n/a
Log files: master.err 0.0 KB
Log files: master.out 0.0 KB
Log files: Total size 0.07 MB
Parsing Blitz-0.log:[line:33] => Server restarted <=
Environment:OMERO_HOME=/opt/OMERO/OMERO.server
Environment:OMERO_NODE=(unset)
Environment:OMERO_MASTER=(unset)
Environment:OMERO_TEMPDIR=/tmp
Environment:PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/usr/lib/jvm/java-7-oracle/bin:/usr/share/Ice-3.4.2:/usr/lib/postgresql/9.1/bin:/opt/OMERO/OMERO.server/bin
Environment:ICE_HOME=/usr/share/Ice-3.4.2
Environment:LD_LIBRARY_PATH=/usr/share/java:/usr/lib:
Environment:DYLD_LIBRARY_PATH=(unset)
OMERO data dir: '/OMERO' Exists? True Is writable? True
OMERO temp dir: '/tmp/omero/tmp' Exists? True Is writable? True (Size: 0)
OMERO.web status... [RUNNING] (PID 21509)