retrieving "tag" API?

[bhcho]

Hi Josh,

the problem is I cannot get the value using the key of idSetMap in Matlab.

Code: Select all

>> idSetMap             
idSetMap =
{4776=[omero.model.TagAnnotationI@760951a0]}

>> idSetMap.get('4776')               
ans =
     []

>> idSetMap.put('aaa','bbb')
ans =
     []

>> idSetMap
idSetMap =
{aaa=bbb, 4776=[omero.model.TagAnnotationI@760951a0]}

>> idSetMap.get('aaa')
ans =
bbb

>> idSetMap.get('4776')
ans =
     []


[jmoore]

If you don't use the iterator method to retrieve the actual key object, then you will need to create a java.lang.Long instead:

Code: Select all

idSetMap.get(java.lang.Long(4776)).


get('4776') is using a string.
~J.

[bhcho]

Thanks so much Josh,

I finally found a way to retrieve them.

Code: Select all

metadataService = omepslid.session.getMetadataService();
try
    imageIds = java.util.ArrayList();
    for i=1:length(IIDs)  % IIDs is a matlab array that holds the image IDs
        imageIds.add(java.lang.Long(IIDs(i)));
    end

    annotationTypes = java.util.ArrayList();
    annotationTypes.add('ome.model.annotations.TagAnnotation');

    % Unused
    annotatorIds = java.util.ArrayList();
    parameters = omero.sys.Parameters();

    idSetMap = metadataService.loadAnnotations('Image', imageIds, annotationTypes, annotatorIds, parameters);
    for i=1:idSetMap.size
        ArrList = idSetMap.get(java.lang.Long(IIDs(i)));
        for j=1:ArrList.size
            tagValue = ArrList.get(j-1).getTextValue().getValue();
            txt = ['Image ID: ' num2str(IIDs(i)) '    TagVale: ' char(tagValue)];
            disp(txt);
        end
    end
   
catch ME
    disp(ME);
    omepslid.client.closeSession();
end


Image ID: 4779    TagVale: I believe
Image ID: 4779    TagVale: Classlabel: Septins
Image ID: 4781    TagVale: Classlabel: Septins
Image ID: 4780    TagVale: Classlabel: Septins
Image ID: 4778    TagVale: Classlabel: vector
Image ID: 4776    TagVale: Classlabel: vector
Image ID: 4777    TagVale: Classlabel: vector




[jmoore]

Glad to hear it, BK!
~J.