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Using scripts in OMERO.insight

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Re: Using scripts in OMERO.insight

Postby jmoore » Fri Dec 10, 2010 10:36 am

Hi Jenn,

if I remember correctly, we had similar issues when looking at your installation due to the Kerberos tokens not being available for that directory. I'm not very familiar with AFS, but my assumption is that to keep the temp directory on /afs/cs.cmu.edu you'd need to keep the server process logged into to Kerberos (I'm not sure what the permitted token timeouts are for your site).

A workaround is to put the temp directory elsewhere by stopping your server, setting OMERO_TEMPDIR and then restarting the server:
Code: Select all
bin/omero admin stop
export OMERO_TEMPDIR=`pwd`/var/tmp
bin/omero admin start


See https://trac.openmicroscopy.org.uk/omero/wiki/TempFileManager for more information.

Cheers,
~Josh.
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