Hi I have been having trouble importing an nd.2 file using your loci plugin on both image j and fiji. I was wondering if you could help me as to why I might be having trouble. Here is the output I get back from Image J. Also I checked the build of the plugin and it is the most recent one.
ImageJ 1.47v; Java 1.6.0_20 [64-bit]; Windows 7 6.1; 11MB of 18430MB (<1%)
java.lang.IndexOutOfBoundsException: Index: 0, Size: 0
at java.util.ArrayList.RangeCheck(ArrayList.java:547)
at java.util.ArrayList.get(ArrayList.java:322)
at loci.formats.in.NativeND2Reader.initFile(NativeND2Reader.java:888)
at loci.formats.FormatReader.setId(FormatReader.java:1244)
at loci.formats.DelegateReader.setId(DelegateReader.java:259)
at loci.plugins.in.ImportProcess.initializeFile(ImportProcess.java:482)
at loci.plugins.in.ImportProcess.execute(ImportProcess.java:146)
at loci.plugins.in.Importer.showDialogs(Importer.java:141)
at loci.plugins.in.Importer.run(Importer.java:79)
at loci.plugins.LociImporter.run(LociImporter.java:81)
at ij.IJ.runUserPlugIn(IJ.java:195)
at ij.IJ.runPlugIn(IJ.java:160)
at ij.IJ.runPlugIn(IJ.java:149)
at HandleExtraFileTypes.openImage(HandleExtraFileTypes.java:258)
at HandleExtraFileTypes.run(HandleExtraFileTypes.java:37)
at ij.IJ.runUserPlugIn(IJ.java:195)
at ij.IJ.runPlugIn(IJ.java:160)
at ij.IJ.runPlugIn(IJ.java:149)
at ij.io.Opener.openWithHandleExtraFileTypes(Opener.java:438)
at ij.io.Opener.openImage(Opener.java:310)
at ij.io.Opener.openImage(Opener.java:333)
at ij.io.Opener.open(Opener.java:143)
at ij.io.Opener.openAndAddToRecent(Opener.java:246)
at ij.plugin.DragAndDrop.openFile(DragAndDrop.java:176)
at ij.plugin.DragAndDrop.run(DragAndDrop.java:152)
at java.lang.Thread.run(Thread.java:619)
Any help would be much appreciated!
Thank you,
Lindsay