Today we are releasing several "Projects" from the OME Consortium which add extra functionality and are fully compatible with the newly released OMERO and Bio-Formats 5.0.0. The Projects included in this release are:
FLIMfit 4.6.4 (Mac-only, Windows version to follow):
- FLIMfit is now compatible with OMERO 5.0.0 and features support for LaVision Imspector .msr files via Bio-Formats 5.0.0;
- Support for Becker & Hickl SPCImage .sdt files has been extended to include measurement mode 13;
u-track 2.1.1:
- u-track now supports OMERO 5.0.0 and is bundled with Bio-Formats 5.0.0;
- Improvements include new graphical interfaces to login and browse data onto an OMERO server;
OMERO.webtagging 1.0.0:
- First full release of this application.
- OMERO.webtagging provides a semi-automatic process for creating and applying tags based on the filename, path and extension of the original data.
- Improvements over the beta version include support for displaying all existing tags, tighter webclient integration and some performance enhancements.
OMERO.figure 1.0.0-beta1:
- OMERO.figure is a new web app for creating figures from images in OMERO.
- It has tools for quickly aligning panels, adjusting rendering settings, scrolling Z and T, adding labels and displaying scalebars. Images can be exported as PDF or saved and shared via the web.
- See http://will-moore.github.io/figure/ for more information.
- This is a beta release; feedback and comments welcome!
OMERO.mtools 1.0.0:
- OMERO.mtools is a suite of MATLAB-based tools for carrying out common image analysis tasks on images stored in an OMERO.server;
- it has its own GUI and only requires an installation of MATLAB Compiler Runtime to run.
- OMERO.mtools has been used to analyse data for several papers published by groups in Dundee; comments and feedback welcome!
OMERO.searcher 0.1.0:
- OMERO.searcher provides the ability to search for images in OMERO by their content (e.g., subcellular patterns) rather than just by their annotations.
- This is an early preview release, not intended for production use. Comments and feedback welcome!
OMERO.csvtools 0.2.2:
- OMERO.csvtools is a script-based tool for mass tagging operations;
- Tag definitions are supplied in a simple, conventional CSV structure, and may be provided through a local file on disk or fetched remotely from an OMERO.server file store.
- This is a preview release, comments and feedback welcome!
These projects are available to download at:
http://downloads.openmicroscopy.org/
Further information for each project is available at:
http://www.openmicroscopy.org/site/products/partner
The OME Consortium will keep on maintaining and developing these applications. Any problems or comments, please use the OME Forums or mailing lists:
http://www.openmicroscopy.org/site/community
Regards,
The OME Team