Hi,
I'm trying to set up Omero.server 5.3.1 but i'm running into a problem with Ice 3.6:
% omero --debug=debug admin start
Returning popen: ['icegridnode', '--version']
Returning popen: ['icegridadmin', '--Ice.Config=/home/omero/OMERO.server/etc/internal.cfg', '-e', 'node ping master']
Returning popen: ['icegridadmin', '--Ice.Config=/home/omero/OMERO.server/etc/internal.cfg', '-e', 'node ping master']
No descriptor given. Using etc/grid/default.xml
Executing: ['icegridnode', '--daemon', '--pidfile', '/home/omero/OMERO.server/var/master/master.pid', '--nochdir', '--Ice.Config=/home/omero/OMERO.server/etc/internal.cfg,/home/omero/OMERO.server/etc/master.cfg', '--deploy', '/home/omero/OMERO.server/etc/grid/default.xml']
Waiting on startup. Use CTRL-C to exit
Returning popen: ['icegridadmin', '--Ice.Config=/home/omero/OMERO.server/etc/internal.cfg', '-e', 'node ping master']
Server not reachable: exception ::Ice::NoEndpointException
{
proxy = BlitzManager -t -e 1.1 @ BlitzAdapters
}
... keeps trying to connect until it times out ...
% omero --debug=debug admin diagnostics
================================================================================
OMERO Diagnostics 5.3.1-ice36-b61
================================================================================
Commands: java -version Returning popen: ['java', '-version']
1.8.0 (/bin/java)
Commands: python -V Returning popen: ['python', '-V']
2.7.5 (/bin/python)
Commands: icegridnode --version Returning popen: ['icegridnode', '--version']
3.6.3 (/bin/icegridnode)
Commands: icegridadmin --version Returning popen: ['icegridadmin', '--version']
3.6.3 (/bin/icegridadmin)
Commands: psql --version Returning popen: ['psql', '--version']
9.4.11 (/bin/psql)
Server: icegridnode Returning popen: ['icegridadmin', '--Ice.Config=/home/omero/OMERO.server/etc/internal.cfg', '-e', 'server list']
not started
Stdout:
Stderr:
icegridadmin: could not contact the default locator:
Network.cpp:2381: Ice::ConnectionRefusedException:
connection refused: Connection refused
Log dir: /home/omero/OMERO.server/var/log exists
Log files: Blitz-0.log 212.0 KB errors=12 warnings=0
Log files: DropBox.log 9.0 KB errors=12 warnings=6
Log files: FileServer.log 2.0 KB
Log files: Indexer-0.log 94.0 KB errors=6 warnings=0
Log files: MonitorServer.log 2.0 KB
Log files: OMEROweb.lock 0.0 KB
Log files: OMEROweb.log 1.0 KB errors=0 warnings=7
Log files: PixelData-0.log 94.0 KB errors=6 warnings=0
Log files: Processor-0.log 84.0 KB errors=23 warnings=46
Log files: Tables-0.log 91.0 KB errors=23 warnings=46
Log files: TestDropBox.log n/a
Log files: master.err 3.0 KB errors=6 warnings=7
Log files: master.out 0.0 KB
Log files: Total size 0.60 MB
Environment:OMERO_HOME=(unset)
Environment:OMERO_NODE=(unset)
Environment:OMERO_MASTER=(unset)
Environment:OMERO_USERDIR=(unset)
Environment:OMERO_TMPDIR=(unset)
Environment:PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/lib/jvm/jre/bin:/usr/share/Ice-3.6.3:/usr/bin:/home/omero/OMERO.server/bin
Environment:PYTHONPATH=(unset)
Environment:ICE_HOME=/usr/share/Ice-3.6.3
Environment:LD_LIBRARY_PATH=/usr/share/java:/usr/lib:/usr/local/lib
Environment:DYLD_LIBRARY_PATH=(unset)
Returning popen: ['icegridadmin', '--Ice.Config=/home/omero/OMERO.server/etc/internal.cfg', '-e', 'application list']
Cannot list deployed applications.
Stdout:
Stderr:
icegridadmin: could not contact the default locator:
Network.cpp:2381: Ice::ConnectionRefusedException:
connection refused: Connection refused
OMERO data dir:'/OMERO' Exists? True Is writable? True
OMERO temp dir:'/home/omero/omero/tmp' Exists? True Is writable? True (Size: 0)
JVM settings: Blitz-${index} -Xmx512m -XX:MaxPermSize=256m -XX:+IgnoreUnrecognizedVMOptions
JVM settings: Indexer-${index} -Xmx341m -XX:MaxPermSize=256m -XX:+IgnoreUnrecognizedVMOptions
JVM settings: PixelData-${index} -Xmx512m -XX:MaxPermSize=256m -XX:+IgnoreUnrecognizedVMOptions
JVM settings: Repository-${index} -Xmx341m -XX:MaxPermSize=256m -XX:+IgnoreUnrecognizedVMOptions
OMERO.web status... [NOT STARTED]
Django version: 1.8.18
Can anyone see where my problem is arising?
Many thanks,
Matt.
