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BioFormats + ITK on Mac: cannot read ZVI data

Historical discussions about the Bio-Formats library. Please look for and ask new questions at https://forum.image.sc/tags/bio-formats
Please note:
Historical discussions about the Bio-Formats library. Please look for and ask new questions at https://forum.image.sc/tags/bio-formats

If you are having trouble with image files, there is information about reporting bugs in the Bio-Formats documentation. Please send us the data and let us know what version of Bio-Formats you are using. For issues with your code, please provide a link to a public repository, ideally GitHub.

Re: BioFormats + ITK on Mac: cannot read ZVI data

Postby hinerm » Tue May 07, 2013 1:40 pm

Hi Thomas,

Yes, definitely. I was just waiting to recommend it until I saw if it passed the build tests or not. ;) It works locally for me of course and incorporates all the latest changes. I also refactored some structural issues so it will be easier for me to update both the Java and C++ codes immediately if needed.

Two things to be aware of:
- SCIFIOImageIO isn't on the default IO list any more, so you'll need to set the ITK_AUTOLOAD_PATH again
- The download function won't overwrite jars in build/lib/jars. This shouldn't be an issue the first time you build but it's just something to note if you download a later patch to the same directory and need updated Java code.

Hope it works for you!

- Mark
hinerm
 
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